Software

 

OsiriX Plugin Tutorial

  1. OsiriX Plugin Tutorial (PDF)

  2. Hello_BMR (Source Code)


NOTE: My previous group software webpage can be found here

OsiriX Plugins

  1. •DCE Tool is a quantitative analysis software tool for dynamic contrast enhanced MRI (DCE-MRI)

  2. •B1 Map is an image analysis tool that enables estimating B1 field inhomogeneity using either Bloch-Siegert shift or double angle method (DAM)

  3. •Fusion Tool allows combining two 4D viewers. When combing two viewers, you can limit slice numbers and temporal points for original and dragged viewers

  4. •Custom 4D Viewer allows customizing the 4D viewer

  5. •Quality Assessment allows computing RMSE (root mean squared error) and MSSIM (mean structural similarity index map) between two images

  6. •Functional MRU Tool

Other Resources

  1. •OsiriX development guide

  2. •Keynote presentation about how to start writing a plugin

  3. •Source code documentation

  4. •OsiriX developers group

  5. •Tutorials for getting started on development for the Mac OS X

  6. •OsiriX Plugin Basics

Please report comments / questions / bugs to Kyung Sung.


Last updated:  2/4/2014

LCAMP is an implementation of the algorithms and examples described in the paper:

  1. •K Sung, BL Daniel, BA Hargreaves. LCAMP: Location Constrained Approximate Message Passing for Compressed Sensing MRI. Magn. Reson. Med. 2013; 70:370-381 (JRNL)

  2. •Download (v0.9)

MATLAB Code / Example

HiSub CS is an implementation of the algorithms and examples described in the paper:

  1. •K Sung, BA Hargreaves. High-Frequency Subband Compressed Sensing MRI using Quadruplet Sampling. Magn. Reson. Med. 2013; 70: 1306–1318 (JRNL)

  2. •Download (v0.9)

HiSub (High-Frequency Subband) CS

LCAMP (Location Constrained Approximate Message Passing)